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Navigation Layout Doesn't Matching Webflow Export

Hi,

I recently finished a website built with webflow and some custom code with a hired developer.

We are having a small layout issue that we cannot reconcile. When exported our navigation on some pages does not match the spacing that was designated and shows up in the webflow preview.

Here are images of the spacing issue I am referring to:
(THIS IS WHAT IS APPEARING)

(THIS IS WHAT IT SHOULD BE — ACCORDING TO THE DESIGN AND WEBFLOW PREVIEW)

The code matches 1:1 and we have tried re exporting and multiple machines and browsers. We have also tried moving around the order of the Nav elements, which resulted which worked for a moment and then after a few refreshes went back to the incorrect spacing.

Webflow Preview.

Live Export.

If you can see a problem please help me identify.
Or if this is a bug I will raise the concern to webflow.

Thanks in advance.